Ing.

Jan Odstrčilík

Ph.D.

FEEC, UBMI – assistant professor

+420 54114 6687
odstrcilik@feec.vutbr.cz

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Ing. Jan Odstrčilík, Ph.D.

Publications

  • 2018

    TORNOW, R.; ODSTRČILÍK, J.; KOLÁŘ, R. Time-resolved quantitative inter-eye comparison of cardiac cycle-induced blood volume changes in the human retina. Biomedical Optics Express, 2018, vol. 9, no. 12, p. 6237-6254. ISSN: 2156-7085.
    Detail | WWW

  • 2017

    ROY, S.; GUMULEC, J.; KUMAR, A.; RAUDENSKÁ, M.; BAIG, M.; POLANSKÁ, H.; BALVAN, J.; GUPTA, M.; BABULA, P.; ODSTRČILÍK, J.; CHOI, I.; PROVAZNÍK, I.; MASAŘÍK, M. The effect of Benzothiazolone-2 on the expression of Metallothionein-3 in modulating Alzheimer's disease. Brain and Behavior, 2017, vol. 7, no. 9, p. 1-9. ISSN: 2162-3279.
    Detail | WWW | Full text in the Digital Library

    TORNOW, R.; MILCZAREK, A.; ODSTRCILIK, J.; KOLAR, R. Binocular video ophthalmoscope for simultaneous recording of sequences of the human retina to compare dynamic parameters. In SPIE Proceedings (Optical Society of America). Novel Biophotonics Techniques and Applications IV. Mnichov: 2017. p. 1-6. ISBN: 9781510612846.
    Detail | WWW

    HRACHO, M.; KOLÁŘ, R.; LABOUNKOVÁ, I.; ODSTRČILÍK, J.; TORNOW, R. Automatic detection of spontaneous venous pulsations using retinal image sequences. In Proceedings of the IV ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing: VipIMAGE 2017. Taylor and Francis, Publication, 2017. p. 1-9. ISBN: 9780415457774.
    Detail

    KOLÁŘ, R.; LABOUNKOVÁ, I.; ODSTRČILÍK, J.; HRACHO, M.; TORNOW, R. Detection of distorted frames in retinal video-sequences via machine learning. In SPIE Proceedings (Optical Society of America). Novel Biophotonics Techniques and Applications IV. SPIE-OSA, 2017. p. 1-4. ISBN: 9781510612846.
    Detail

  • 2016

    KOLÁŘ, R.; TORNOW, R.; ODSTRČILÍK, J.; LIBERDOVÁ, I. Registration of retinal sequences from new video-ophthalmoscopic camera. BIOMED ENG ONLINE, 2016, vol. 15, no. 57, p. 1-17. ISSN: 1475-925X.
    Detail | WWW | Full text in the Digital Library

    VERMA, P.; ANJUM, S.; KHAN, S.; ROY, S.; ODSTRČILÍK, J.; MATHUR, A. Envisaging the Regulation of Alkaloid Biosynthesis and Associated Growth Kinetics in Hairy Roots of Vinca minor Through the Function of Artificial Neural Network. APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY, 2016, vol. 2016, no. 6, p. 1154-1166. ISSN: 0273-2289.
    Detail | WWW

  • 2015

    KOLÁŘ, R.; TORNOW, R.; ODSTRČILÍK, J. Retinal Image Registration for Eye Movement Estimation. In Proceedings of IEEE EMBC. Proceedings IEEE EMBC. 2015. p. 5247-5250. ISBN: 978-1-4244-9270- 1. ISSN: 1557- 170X.
    Detail

    ODSTRČILÍK, J.; KOLÁŘ, R.; HARABIŠ, V.; TORNOW, R. Classification- Based Blood Vessel Segmentation in Retinal Images. In Computational Vision and Medical Image Processing V. London, UK: CRC Press Taylor and Francis Group, 2015. p. 95-100. ISBN: 978-1-138-02926- 2.
    Detail

    TORNOW, R.; KOLÁŘ, R.; ODSTRČILÍK, J. Non- mydriatic video ophthalmoscope to measure fast temporal changes of the human retina. In Proceedings of SPIE, Volume 9540. 2015. p. 954006 (954006-6 p.)ISBN: 9781628417050.
    Detail

    KOLÁŘ, R.; TORNOW, R.; ODSTRČILÍK, J. Video ophthalmoscope measures fast temporal changes in the human retina. SPIE Newsroom, 2015, no. 2015, p. 1-2. ISSN: 1818- 2259.
    Detail

    ČMIEL, V.; ODSTRČILÍK, J.; SVOBODA, O.; BAIAZITOVA, L.; PROVAZNÍK, I. Method for Adult Cardiomyocytes Long- Term Viability Monitoring Using Confocal Microscopy Techniques. In Computing in Cardiology 2015. 42. Nice, France: Computing in Cardiology, Inc., 2015. p. 961-964. ISBN: 978-1-4799-4347- 0.
    Detail

    ČMIEL, V.; ODSTRČILÍK, J.; RONZHINA, M.; PROVAZNÍK, I. Real-time measurement of cardiomyocyte contraction and calcium transients using fast image processing algorithms. In World Congress on Medical Physics and Biomedical Engineering. IFMBE PROCEEDINGS. Springer International Publishing, 2015. p. 256-259. ISBN: 978-3-319-19386-1. ISSN: 1680-0737.
    Detail

    KOLÁŘ, R.; SEMERÁD, L.; DRAHANSKÝ, M.; ODSTRČILÍK, J.; HÁJEK, J.; BOROVSKÝ, J. Bimodal Eye Imaging System for Biometric and Medical Applications. In Security and Protection of Information 2015. Brno: University of Defence in Brno, 2015. p. 83-95. ISBN: 978-80-7231-997-8.
    Detail

    HÁJEK, J.; DRAHANSKÝ, M.; KOLÁŘ, R.; ODSTRČILÍK, J.; BOROVSKÝ, J. Bimodal eye imaging system. In Signal-Image Technology and Internet-Based Systems. Bangkok: Institute of Electrical and Electronics Engineers, 2015. p. 572-575. ISBN: 978-1-4673-9721-6.
    Detail | WWW

    ODSTRČILÍK, J.; ČMIEL, V.; KOLÁŘ, R.; RONZHINA, M.; BAIAZITOVA, L.; PEŠL, M.; PŘIBYL, J.; PROVAZNÍK, I. Computer Analysis of Isolated Cardiomyocyte Contraction Process via Advanced, Image Processing Techniques. In Computing in Cardiology 2015. 42. Nice, France: Computing in Cardiology, Inc., 2015. p. 453-456. ISBN: 978-1-4799-4347- 0.
    Detail

    ODSTRČILÍK, J.; KOLÁŘ, R.; TORNOW, R.; BUDAI, A.; JAN, J.; MACKOVÁ, P.; VODÁKOVÁ, M. Analysis of the Retinal Nerve Fiber Layer Texture Related to the Thickness Measured by Optical Coherence Tomography. In Developments in Medical Image Processing and Computational Vision. Lecture Notes in Computational Vision and Biomechanics. Switzerland: Springer International Publishing, 2015. p. 19-40. ISBN: 978-3-319-13406- 2.
    Detail

  • 2014

    ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; TORNOW, R.; BUDAI, A. Blood Vessel Segmentation in Video- Sequences From the Human Retina. In 2014 IEEE International Conference on Imaging Systems and Techniques (IST) Proceedings. Santorini, Greece: IEEE, 2014. p. 129-133. ISBN: 978-1-4799-6748- 3.
    Detail

    KOLÁŘ, R.; HOEHER, B.; ODSTRČILÍK, J.; SCHMAUSS, B.; JAN, J. Registration of image sequences from experimental low-cost fundus camera. In Biomedical Image Registration. Lecture Notes in Computer Science. London: Springer International Publishing, 2014. p. 174-183. ISBN: 978-3-319-08553-1.
    Detail | WWW

    ODSTRČILÍK, J.; KOLÁŘ, R.; TORNOW, R.; JAN, J.; BUDAI, A.; MAYER, M.; VODÁKOVÁ, M.; LAEMMER, R.; LAMOŠ, M.; KUNA, Z.; GAZÁREK, J.; KUBĚNA, T.; ČERNOŠEK, P.; RONZHINA, M. Thickness related textural properties of retinal nerve fiber layer in color fundus images. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2014, vol. 38, no. 6, p. 508-516. ISSN: 0895-6111.
    Detail

  • 2013

    KOLÁŘ, R.; TORNOW, R.; LAEMMER, R.; ODSTRČILÍK, J.; GAZÁREK, J.; JAN, J.; KUBĚNA, T.; ČERNOŠEK, P.; MAYER, M. Analysis of Visual Appearance of Retinal Nerve Fibers in High Resolution Fundus Images: A Study on Normal Subjects. Computational and Mathematical Methods in Medicine (Print), 2013, vol. 2013, no. 12, p. 1-10. ISSN: 1748- 670X.
    Detail

    MACKOVÁ, P.; KOLÁŘ, R.; ODSTRČILÍK, J. Analýza geometrického zkreslení multimodálních obrazových dat sítnice. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2013, vol. 15, no. 5, p. 315-321. ISSN: 1213- 1539.
    Detail

    KOLÁŘ, R.; ODSTRČILÍK, J.; MACKOVÁ, P.; LAEMMER, R. Registration of the long- term autofluorescence retinal images taken from glaucomatic patients. In Computational Vision and Medical Image Processing. London: Taylor & Francis, 2013. p. 115-119. ISBN: 978-1-138-00081- 0.
    Detail

    KOLÁŘ, R.; HARABIŠ, V.; ODSTRČILÍK, J. Hybrid retinal image registration using phase correlation. IMAGING SCIENCE JOURNAL, 2013, vol. 61, no. 4, p. 269-384. ISSN: 1368- 2199.
    Detail | WWW

    ODSTRČILÍK, J.; KOLÁŘ, R.; TORNOW, R.; BUDAI, A.; JAN, J.; MACKOVÁ, P.; VODÁKOVÁ, M. Analysis of the retinal nerve fiber layer texture related to the thickness measured by optical coherence tomography. In Computational Vision and Medical Image Processing IV. 4. London: Taylor & Francis Group, 2013. p. 105-110. ISBN: 978-1-138-00081- 0.
    Detail

    KÖHLER, T.; BUDAI, A.; KRAUS, M.; ODSTRČILÍK, J.; MICHELSON, G.; HORNEGGER, J. Automatic no- reference quality assessment for retinal fundus images using vessel segmentation. In 26th IEEE International Symposium on Computer- Based Medical Systems. 26. Porto, Portugalsko: University of Porto, 2013. p. 95-100. ISBN: 978-1-4799-1053- 3.
    Detail

    ODSTRČILÍK, J.; KOLÁŘ, R.; BUDAI, A.; HORNEGGER, J.; JAN, J.; GAZÁREK, J.; KUBĚNA, T.; ČERNOŠEK, P.; SVOBODA, O.; ANGELOPOULOU, E. Retinal Vessel Segmentation by Improved Matched Filtering: Evaluation on a New High– Resolution Fundus Image Database. IET Image Processing, 2013, vol. 7, no. 4, p. 373-383. ISSN: 1751- 9659.
    Detail | WWW

    ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; MACKOVÁ, P. Analýza obrazových dat sítnice pro podporu diagnostiky glaukomu. In Nové směry v biomedicínském inženýrství. 2013. Brno, ČR: Společnost elektrotechnického inženýrství, 2013. p. 81-92. ISBN: 978-80-214-4814- 8.
    Detail

  • 2012

    ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; GAZÁREK, J.; KUNA, Z.; VODÁKOVÁ, M. Analysis of retinal nerve fiber layer via Markov random fields in color fundus images. In Proceedings of 19th International Conference on Systems, Signals and Image Processing (IEEE - IWSSIP 2012). Vídeň, Rakousko: TU Wien, 2012. p. 504-507. ISBN: 978-1-4577-2191- 5.
    Detail

    JAN, J.; ODSTRČILÍK, J.; GAZÁREK, J.; KOLÁŘ, R. Retinal Image Analysis Aimed at Blood Vessel Tree Segmentation and Early Detection of Neural- Layer Deterioration. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2012, vol. 2012, no. 6, p. 431-441. ISSN: 0895- 6111.
    Detail

  • 2011

    ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; BUDAI, A. Gold Standard Database to Support Evaluation of Fundus Image Segmentation Methods. Abstracts of Contributions to 7th International Workshop on Data-Algorithms- Decision Making. UTIA. Praha, ČR: UTIA AV ČR, 2011. p. 46-46.
    Detail

    JAN, J.; KOLÁŘ, R.; KUBEČKA, L.; ODSTRČILÍK, J.; GAZÁREK, J. Ophthalmological Image Processing and Analysis in DAR - a survey. Abstracts of Contributions to 7th Intern. Workshop on Data - Algorithms - Decision making. 1. Praha: UTIA AVČR, 2011. p. 25-25.
    Detail

    KOLÁŘ, R.; ODSTRČILÍK, J.; HARABIŠ, V.; JAN, J. Illumination Correction and Contrast Equalization in Colour Fundus Images. In 19th European Signal Processing Conference (EUSIPCO-2011). 18th European Signal Processing Conference (EUSIPCO-2010). EURASIP. Barcelona: EURASIP, 2011. p. 298-302. ISSN: 2076- 1465.
    Detail

    BUDAI, A.; ODSTRČILÍK, J.; KOLÁŘ, R.; HORNEGGER, J.; JAN, J.; KUBĚNA, T.; MICHELSON, G. A Public Database for the Evaluation of Fundus Image Segmentation Algorithms. Proc. of the Association for Research in Vision and Ophthalmology conference (ARVO) 2011. ARVO 2011. Fort Lauderdale, Florida, USA: Association for Research in Vision and Ophthalmology, Inc., 2011. p. 1-2.
    Detail

    JAN, J.; KOLÁŘ, R.; KUBEČKA, L.; ODSTRČILÍK, J.; GAZÁREK, J. FUSION BASED ANALYSIS OF OPHTHALMOLOGIC IMAGE DATA. Kybernetika, 2011, vol. 47 (2011), no. 3, p. 455-481. ISSN: 0023- 5954.
    Detail

  • 2010

    ODSTRČILÍK, J.; KOLÁŘ, R.; HARABIŠ, V.; GAZÁREK, J.; JAN, J. Retinal Nerve Fiber Layer Analysis via Markov Random Fields Texture Modelling. In 18th European Signal Processing Conference (EUSIPCO-2010). 18th European Signal Processing Conference (EUSIPCO-2010). EURASIP. EURASIP, 2010. p. 1650-1654. ISSN: 2076- 1465.
    Detail

    NOVOTNÝ, A.; ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J. Texture Analysis Of Nerve Fibre Layer In Retinal Images Via Local Binary Patterns And Gaussian Markov Random Fields. In 20th Biennial International EURASIP Conference BIOSIGNAL 2010. Analysis of Biomedical Signals and Images. EURASIP. Brno: EURASIP, 2010. p. 308-315. ISBN: 978-80-214-4106- 4. ISSN: 1211- 412X.
    Detail

    ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; GAZÁREK, J. Retinal nerve fiber layer texture analysis via markov random fields. Abstracts of Contributions to 6th International Workshop on Data-Algorithms- Decision Making. UTIA. Praha, ČR: UTIA AV ČR, 2010. p. 49-49.
    Detail

    GAZÁREK, J.; JAN, J.; KOLÁŘ, R.; ODSTRČILÍK, J. Bimodal Comparison of Retinal Nerve Fibre Layer Thickness: Fundus Camera versus Optical Coherence Tomography. Abstracts of Contributions to 6th International Workshop on Data-Algorithms- Decision Making. UTIA. Praha, ČR: UTIA AV ČR, 2010. p. 50-50.
    Detail

  • 2009

    ODSTRČILÍK, J.; JAN, J.; KOLÁŘ, R.; GAZÁREK, J. Improvement of Vessel Segmentation by Matched Filtering in Colour Retinal Images. In IFMBE Proceedings of World Congress on Medical Physics and Biomedical Engineering. Springer. Springer, 2009. p. 327-330. ISBN: 978-3-642-03897- 6.
    Detail

    ODSTRČILÍK, J.; JAN, J.; KOLÁŘ, R. Vessel Segmentation by Matched Filtering in Colour Retinal Images. Abstracts of Contributions to 5th International Workshop on Data - Algorithms - Decision Making. Ústav teorie informace AV ČR, v.v.i. 2009. p. 48-48.
    Detail

  • 2008

    ODSTRČILÍK, J.; JAN, J.; KOLÁŘ, R. Segmentation of Vessel Structure in Retinal Images by Matched Filtering. Analysis of Biomedical Signals and Images, 2008, vol. 2008(19), no. 1, p. 178-183. ISSN: 1211- 412X.
    Detail

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