Detail publikace

Computational molecular evolution - from mathematical models to novel distance metric based on intra-group analysis

Originální název

Computational molecular evolution - from mathematical models to novel distance metric based on intra-group analysis

Anglický název

Computational molecular evolution - from mathematical models to novel distance metric based on intra-group analysis

Jazyk

en

Originální abstrakt

In the proposed paper we analyse and discuss the molecular evolution from the point of view of mathematical analysis and statistics. Some characteristics of distance-based algorithms for phylogenetic inference are depicted. We furthermore use knowledge of mathematical models to design a modified algorithm for phylogenetic tree reconstruction. We implement the presented methods in the form of a simple phylogenetic library, briefly report about results of our case study and finally show a way for building a web interface for biological purposes through Mobyle portal. Finally, we draw a conclusion and discuss possible future work on the project.

Anglický abstrakt

In the proposed paper we analyse and discuss the molecular evolution from the point of view of mathematical analysis and statistics. Some characteristics of distance-based algorithms for phylogenetic inference are depicted. We furthermore use knowledge of mathematical models to design a modified algorithm for phylogenetic tree reconstruction. We implement the presented methods in the form of a simple phylogenetic library, briefly report about results of our case study and finally show a way for building a web interface for biological purposes through Mobyle portal. Finally, we draw a conclusion and discuss possible future work on the project.

BibTex


@inproceedings{BUT76292,
  author="Ivan {Vogel} and Pavel {Očenášek} and František {Zedek}",
  title="Computational molecular evolution - from mathematical models to novel distance metric based on intra-group analysis",
  annote="In the proposed paper we analyse and discuss the molecular evolution from the
point of view of mathematical analysis and statistics. Some characteristics of
distance-based algorithms for phylogenetic inference are depicted. We furthermore
use knowledge of mathematical models to design a modified algorithm for
phylogenetic tree reconstruction. We implement the presented methods in the form
of a simple phylogenetic library, briefly report about results of our case study
and finally show a way for building a web interface for biological purposes
through Mobyle portal. Finally, we draw a conclusion and discuss possible future
work on the project.",
  address="Brno University of Technology",
  booktitle="EDS '11 IMAPS CS International Conference Proceedings",
  chapter="76292",
  edition="NEUVEDEN",
  howpublished="print",
  institution="Brno University of Technology",
  year="2011",
  month="april",
  pages="264--269",
  publisher="Brno University of Technology",
  type="conference paper"
}