Detail publikace

Identification of housekeeping genes in Clostridium beijerinckii NRRL B-598 RNA-Seq transcriptome

Originální název

Identification of housekeeping genes in Clostridium beijerinckii NRRL B-598 RNA-Seq transcriptome

Anglický název

Identification of housekeeping genes in Clostridium beijerinckii NRRL B-598 RNA-Seq transcriptome

Jazyk

en

Originální abstrakt

Housekeeping genes are responsible for maintenance of basic cellular function. Their expression level is expected to be constant under normal as well as stress conditions and in all stages of cell cycle. Thus, the housekeeping genes represent the minimal set of genes required to sustain life. In addition, the housekeeping genes are used in many biotechnological applications and genomic studies as reference genes for data normalization. In this study, we focused on identification of housekeeping genes in Clostridium beijerinckii NRRL B-598 genome. We performed bioinformatics analysis of transcriptomic data of this strain obtained by RNA-Seq technology and differential expression analysis of processed data revealed candidate reference genes for Clostridium beijerinckii NRRL B-598.

Anglický abstrakt

Housekeeping genes are responsible for maintenance of basic cellular function. Their expression level is expected to be constant under normal as well as stress conditions and in all stages of cell cycle. Thus, the housekeeping genes represent the minimal set of genes required to sustain life. In addition, the housekeeping genes are used in many biotechnological applications and genomic studies as reference genes for data normalization. In this study, we focused on identification of housekeeping genes in Clostridium beijerinckii NRRL B-598 genome. We performed bioinformatics analysis of transcriptomic data of this strain obtained by RNA-Seq technology and differential expression analysis of processed data revealed candidate reference genes for Clostridium beijerinckii NRRL B-598.

BibTex


@inproceedings{BUT159557,
  author="Kateřina {Jurečková} and Karel {Sedlář} and Ivo {Provazník}",
  title="Identification of housekeeping genes in Clostridium beijerinckii NRRL B-598 RNA-Seq transcriptome",
  annote="Housekeeping genes are responsible for maintenance of basic cellular function. Their expression level is expected to be constant under normal as well as stress conditions and in all stages of cell cycle. Thus, the housekeeping genes represent the minimal set of genes required to sustain life. In addition, the housekeeping genes are used in many biotechnological applications and genomic studies as reference genes for data normalization. In this study, we focused on identification of housekeeping genes in Clostridium beijerinckii NRRL B-598 genome. We performed bioinformatics analysis of transcriptomic data of this strain obtained by RNA-Seq technology and differential expression analysis of processed data revealed candidate reference genes for Clostridium beijerinckii NRRL B-598.",
  address="Czech Society of Industrial Chemistry",
  booktitle="Proceedings of the 7th International Conference on Chemical Technology",
  chapter="159557",
  howpublished="online",
  institution="Czech Society of Industrial Chemistry",
  year="2019",
  month="october",
  pages="67--71",
  publisher="Czech Society of Industrial Chemistry",
  type="conference paper"
}