Detail publikace

Cross-Correlation Based Detection of Contigs Overlaps

JUGAS, R. VÍTEK, M. SEDLÁŘ, K. ŠKUTKOVÁ, H.

Originální název

Cross-Correlation Based Detection of Contigs Overlaps

Typ

článek ve sborníku ve WoS nebo Scopus

Jazyk

angličtina

Originální abstrakt

The current methods use string algorithms based on dynamic programming computing with characters (A, C, G, T) representing nucleotides, but if applied to long sequences, e.g. contigs, they tend to be time-consuming. We applied another approach based on genomic signal processing to evaluate the further merging and overlaps between the contigs.

Klíčová slova

bioinformatics; genomic signal processing;assembly; correlation

Autoři

JUGAS, R.; VÍTEK, M.; SEDLÁŘ, K.; ŠKUTKOVÁ, H.

Vydáno

25. 5. 2018

Nakladatel

IEEE

Místo

New York

ISBN

978-953-233-095-3

Kniha

MIPRO 2018 proceedings

Strany od

155

Strany do

158

Strany počet

4

URL

https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=8400030

BibTex

@inproceedings{BUT149580,
  author="Robin {Jugas} and Martin {Vítek} and Karel {Sedlář} and Helena {Vítková}",
  title="Cross-Correlation Based Detection of Contigs Overlaps",
  booktitle="MIPRO 2018 proceedings",
  year="2018",
  pages="155--158",
  publisher="IEEE",
  address="New York",
  doi="10.23919/MIPRO.2018.8400030",
  isbn="978-953-233-095-3",
  url="https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=8400030"
}