Detail publikace

Cross-Correlation Based Detection of Contigs Overlaps

Originální název

Cross-Correlation Based Detection of Contigs Overlaps

Anglický název

Cross-Correlation Based Detection of Contigs Overlaps

Jazyk

en

Originální abstrakt

The current methods use string algorithms based on dynamic programming computing with characters (A, C, G, T) representing nucleotides, but if applied to long sequences, e.g. contigs, they tend to be time-consuming. We applied another approach based on genomic signal processing to evaluate the further merging and overlaps between the contigs.

Anglický abstrakt

The current methods use string algorithms based on dynamic programming computing with characters (A, C, G, T) representing nucleotides, but if applied to long sequences, e.g. contigs, they tend to be time-consuming. We applied another approach based on genomic signal processing to evaluate the further merging and overlaps between the contigs.

BibTex


@inproceedings{BUT149580,
  author="Robin {Jugas} and Martin {Vítek} and Karel {Sedlář} and Helena {Škutková}",
  title="Cross-Correlation Based Detection of Contigs Overlaps",
  annote="The current methods use string algorithms based on dynamic
programming computing with characters (A, C, G, T)
representing nucleotides, but if applied to long sequences, e.g.
contigs, they tend to be time-consuming. We applied another
approach based on genomic signal processing to evaluate the
further merging and overlaps between the contigs.",
  address="MIPRO Croatian Society",
  booktitle="MIPRO 2018 proceedings",
  chapter="149580",
  doi="10.23919/MIPRO.2018.8400030",
  howpublished="electronic, physical medium",
  institution="MIPRO Croatian Society",
  number="1",
  year="2018",
  month="may",
  pages="177--188",
  publisher="MIPRO Croatian Society",
  type="conference paper"
}