Detail publikace

DNA reads feature extraction analysis

JUGAS, R.

Originální název

DNA reads feature extraction analysis

Typ

článek ve sborníku ve WoS nebo Scopus

Jazyk

angličtina

Originální abstrakt

As the price of genome sequencing decreased, the complete genome sequencing is the new standard for exploring biological abilities of organisms. The commonly known contaminants like proteins and RNA are efficiently ousted but there is another contaminant which is diverse DNA. DNA contaminants are common in sequencing output and until recently nobody reckons with it, they are also part of already published genomes. The paper deals with issues by using alternative approach of genomic signal processing and other computational methods. The main objective is to detect contaminants in sequencing output and evaluate the analyses of usable features.

Klíčová slova

sequencing; genomic signal processing; features; contaminants; clustering; PCA; bioinformatics

Autoři

JUGAS, R.

Vydáno

29. 8. 2017

ISBN

978-80-214-5526-9

Kniha

Proceedings of IEEE Student Branch Conference Mikulov 2017

Číslo edice

1

Strany od

33

Strany do

36

Strany počet

4

BibTex

@inproceedings{BUT138754,
  author="Robin {Jugas}",
  title="DNA reads feature extraction analysis",
  booktitle="Proceedings of IEEE Student Branch Conference Mikulov 2017",
  year="2017",
  number="1",
  pages="33--36",
  isbn="978-80-214-5526-9"
}