Detail publikace

Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling

KATEŘINA, S. SEDLÁŘ, K. BOSÁK, J. CHALOUPKOVÁ, E. SEDLÁČEK, I. PROVAZNÍK, I. ŠMAJS, D.

Originální název

Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling

Typ

článek v časopise ve Web of Science, Jimp

Jazyk

angličtina

Originální abstrakt

Pragia fontium is one of the few species that belongs to the group of atypical hydrogen sulfide-producing enterobacteria. Unlike other members of this closely related group, P. fontium is not associated with any known host and has been reported as a free-living bacterium. Whole genome sequencing and metabolic fingerprinting confirmed the phylogenetic position of P. fontium inside the group of atypical H2S producers. Genomic data have revealed that P. fontium 24613 has limited pathogenic potential, although there are signs of genome decay. Although the lack of specific virulence factors and no association with a host species suggest a free-living style, the signs of genome decay suggest a process of adaptation to an as-yet-unknown host.

Klíčová slova

Pragia fontium; Enterobacteriaceae; whole genome sequence; phylogeny; free-living bacteria

Autoři

KATEŘINA, S.; SEDLÁŘ, K.; BOSÁK, J.; CHALOUPKOVÁ, E.; SEDLÁČEK, I.; PROVAZNÍK, I.; ŠMAJS, D.

Vydáno

30. 3. 2017

Nakladatel

SAGE Publishing

ISSN

1176-9343

Periodikum

EVOLUTIONARY BIOINFORMATICS

Ročník

13

Číslo

1

Stát

Spojené království Velké Británie a Severního Irska

Strany od

1

Strany do

7

Strany počet

7

URL

https://doi.org/10.1177/1176934317700863

Plný text v Digitální knihovně

http://hdl.handle.net/11012/68348

BibTex

@article{BUT134624,
  author="Kateřina {Snopková} and Karel {Sedlář} and Juraj {Bosák} and Eva {Chaloupková} and Ivo {Sedláček} and Valentine {Provazník} and David {Šmajs}",
  title="Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling",
  journal="EVOLUTIONARY BIOINFORMATICS",
  year="2017",
  volume="13",
  number="1",
  pages="1--7",
  doi="10.1177/1176934317700863",
  issn="1176-9343",
  url="https://doi.org/10.1177/1176934317700863"
}