Publication detail

Expression and regulation of transposable elements in the dioecious plant Silene latifolia

VOGEL, I.

Original Title

Expression and regulation of transposable elements in the dioecious plant Silene latifolia

Type

journal article - other

Language

English

Original Abstract

Gypsy and Copia LTR retrotransposons dominate genome of the dioecious plantSilene latifolia. In this study, we measured in-silico the transcription of various transposable element (TE) families in different organs using NGS data. We found that the most expressed TE families were Athila and Tekay/Del (both are Gypsy elements) and Angela (Copia element).  The study furthermore deals with small noncoding RNAs in transposable elements and potencial correlation between transposon activity and small RNA abundance.

Keywords

transposable elements, Silene latifolia, expression  

Authors

VOGEL, I.

RIV year

2014

Released

31. 12. 2014

ISBN

1759-6653

Periodical

GENOME BIOL EVOL

Year of study

2014

Number

1

State

United Kingdom of Great Britain and Northern Ireland

Pages from

1

Pages to

13

Pages count

13

URL

https://www.fit.vut.cz/research/publication/10653/

BibTex

@article{BUT111607,
  author="Ivan {Vogel}",
  title="Expression and regulation of transposable elements in the dioecious plant Silene latifolia",
  journal="GENOME BIOL EVOL",
  year="2014",
  volume="2014",
  number="1",
  pages="1--13",
  issn="1759-6653",
  url="https://www.fit.vut.cz/research/publication/10653/"
}