Course detail

Biochemistry II

FCH-MCO_BCH2Acad. year: 2015/2016

Metabolic pathways . Bioenergetics and oxidative metabolism. Carbohydrate metabolism - major metabolic pathways and their control, special pathways. Tricarboxylic acid cycle. Electron transport chain. Oxidative phosphorylation. Porfyrin and heme metabolism. Lipid metabolism - utilization and storage of energy. Amino acid metabolism. Metabolic interrelationships and control. Compartmentation. Membrane transport. Biochemistry of hormones and the hormonal cascade system. Molecular cell biology. Mineral metabolism. Nucelotide metabolism. Biosynthesis of nucleic acids. Proteosynthesis.

Language of instruction

Czech

Number of ECTS credits

4

Mode of study

Not applicable.

Learning outcomes of the course unit

The course Biochemistry II is focused on detailed study of metabolic pathways and their regulation on molecular as well as cellular level. The knowlege obtained after passing the course can serve as basis for further studies, especially for biotechnology, molecular biology and bioengineering.

Prerequisites

Examination - Biochemistry I.

Co-requisites

Not applicable.

Planned learning activities and teaching methods

The course uses teaching methods in form of Lecture - 2 teaching hours per week. The e-learning system (LMS Moodle) is available to teachers and students.

Assesment methods and criteria linked to learning outcomes

Credit test. Examination - written and oral part.

Course curriculum

1.part – animal cell
- Bioenergetics; mechanisms of enzyme catalysis; regulation of enzyme activity. Cell signalization; regulation of cell metabolism (hormones).
Gene expression and regulation in prokaryotic and eukarytic organisms. Posttranslation modifications.
Primary and secondary metabolism; mteabolic pathways, metabolism of specifc groups of lipids and amino acids. Regulation of intermediary metabolism. Pathobiochemistry.
Secondary metabolites of some animals – feromons, allomons; polyamines.

2.part – microorganisms.
Microorganism types according to energy sources, nutrition and metabolism type. Specificity of microbial metabolism, metabolic adaptation, stress factors, extremophilles.
Primary and secondary metabolism of microorganisms. Fermentation types, regulation of primary metabolite production.
Biosynthesis of selected microbial secondary metabolites - antibiotics, vitamins, polysaccharides..
Biodegradation, bioremediation and biotransformation - overview.

3.part –plants
Plant metabolism, overview of main pathways of primary and secondary metabolism. Photosynthesis.
Production of selected plant secondary metabolites – aromatic compounds, natural colourants, alcaloids, steroids, glykosides, terpenes.

Work placements

Not applicable.

Aims

The aim of the course Biochemistry II is to introduce basic principles of cell metabolism and its regulation. Based on general thermodynamic principles the course of central biochemical pathways including metabolism of saccharides, fatty acids and amino acids is elucidated. Further, basic principles of biological oxidations, cell energy production and photosynthesis are discussed. Next, metabolism of nucleic acids and proteins and processes involved in gene expression are introduced. As a part of course intermediate metabolism and complex regulation of metabolic pathways are presented.

Specification of controlled education, way of implementation and compensation for absences

none

Recommended optional programme components

Not applicable.

Prerequisites and corequisites

Not applicable.

Basic literature

Vodrážka Z.: Biochemie. Academia Praha, Praha 1999. (CS)
Stryer L.: Biochemistry. New York 1988. (CS)

Recommended reading

Alberts B., Bray D., Johnson A., Lewis J., Raff M., Robertson K., Walter P.: Základy buněčné biologie. Espero Publishing, Ústí n. Labem 2005. (CS)
Voet D., Voet J. G.: Biochemie. Victoria Publishing a.s., Praha 1995. (CS)

Classification of course in study plans

  • Programme NPCP_SCH Master's

    branch NPCO_SCH , 1. year of study, winter semester, compulsory

  • Programme NPCP_CHTP Master's

    branch NPCO_CHTP , 1. year of study, winter semester, compulsory

  • Programme NKCP_CHTP Master's

    branch NKCO_CHTP , 1. year of study, winter semester, compulsory

  • Programme NPCP_MA Master's

    branch NPCO_MA , 1. year of study, winter semester, compulsory

  • Programme CKCP_CZV lifelong learning

    branch CKCO_CZV , 1. year of study, winter semester, compulsory

Type of course unit

 

Lecture

26 hours, optionally

Teacher / Lecturer